Browse of TCMCG006C63007 protein

CDS

Accession Number	TCMCG006C63007
gbkey	CDS
Protein Id	XP_013715515.1
Location	complement(join(19310906..19310947,19311047..19311133,19311221..19311295,19311411..19311527,19311612..19311695,19311937..19312002,19312150..19312215,19312476..19312547,19312634..19312735,19312826..19313003,19313078..19313133,19313500..19313607,19313683..19313751,19313834..19313942,19314135..19314223,19314344..19314418,19314797..19314919,19315154..19315273,19315376..19315456,19315531..19315677,19315764..19315842,19315938..19316012,19316279..19316388,19316505..19316603,19316877..19316992,19317086..19317194,19317276..19317494,19317589..19317854,19318205..19318362,19318454..19318607,19318761..19318827,19319117..19319146))
Gene	LOC106419299
GeneID	106419299
Organism	Brassica napus

Protein

Length	1115aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013860061.2
Definition	ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Belongs to the peptidase C19 family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01002        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11838        [VIEW IN KEGG]
EC	3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04068        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map04068        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004843        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006508        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008233        [VIEW IN EMBL-EBI] GO:0008234        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009753        [VIEW IN EMBL-EBI] GO:0009755        [VIEW IN EMBL-EBI] GO:0009867        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019783        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0032870        [VIEW IN EMBL-EBI] GO:0036459        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070011        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071229        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071395        [VIEW IN EMBL-EBI] GO:0071495        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0101005        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACTATAATGACTCCGCCTCCTGGTGATCAAGAGGACGAGGAGATGCTTGTGCCGCATTCAGATTTGGTTGACGGCACTACTCAGCCCATGGAAGTTTCGGAAACTGAGGCTGCTGTGAGTACTGTGGAGAACCAGCAGCCCGCTGAGGATCCTCCCACTCTGAAATTCACGTGGACTGTCCCTAACTTCTCTAGGCAGAACACCAGGAAGCATTATTCTGAAGTATTTGTCGTTGGAGGTTACAAATGGCGCATATTAATATTCCCGAAAGGGAACAATGTTGACCATTTGTCCATGTACTTGGATGTTGCTGATGCTGCGACTTTGCCGTACGGTTGGAGCAGATACGCTCAGTTCAGTCTGGCTGTGGTTAATCAAATCCACACGAGATATACCATTAGAAAAGAAACGCAACATCAATTCAATGCAAGAGAAAGCGATTGGGGATTTACATCATTCATGCCTCTCAGCGAACTTTATGATCCTAGTAGAGGTTATTTAGTGAATGATACTGTTTACGTTGAGGCTGAAGTCGCTGTACGTAAGGTTCTTGATTACTGGTCATACGACTCTAAAAAAGAGACTGGTTTTGTTGGTCTCAAGAACCAAGGTGCAACTTGTTACATGAATTCTCTCCTACAGACACTATACCACATACCTTACTTCAGAAAGGCTGTATACCACATGCCGACAACTGAGAACGACGCGCCCACAGCAAGTATACCTTTGGCTCTCCAAAGTTTGTTTTACAAGCTCCAATATAACGACACTAGTGTTGCGACTAAAGAGCTGACAAAGTCGTTTGGTTGGGATACATATGATTCTTTCATGCAACATGATGTCCAAGAACTCAATCGAGTTCTCAGCGAAAAACTTGAGGACAAGATGAAGGGAACTGTTGTGGAGGGAACAATACAACAGCTATTTGAGGGTCACCATATGAATTACATTGAGTGCATAAATGTCGATTACAAATCTACACGGAAAGAATCATTTTATGACCTTCAGCTGGATGTTAAAGGCTGCAAGGATGTTTATGCTTCTTTTGACAAATATGTTGAAGTTGAACGCCTTGAAGGAGACAACAAATATCATGCAGAAGGACATGGTTTACAGGATGCAAAAAAAGGCGTTCTTTTCATCGACTTTCCACCGGTTCTTCAGCTCCAGCTCAAGAGGTTTGAATATGACTTCATGAGGGACACCATGGTGAAGATAAATGATCGGTATGAATTCCCTCTTGAACTGGATCTTGATAGAGAGAATGGAAAGTATTTATCCCCTGATGCTGACAGGAGTGTCCGCAACCTTTACACGCTTCACAGTGTGTTAGTTCATAGTGGAGGAGTACATGGTGGGCACTATTACGCTTTTATAAGGCCGACGCTCTCTGATCAATGGTATAAATTTGATGATGAACGAGTAACCAAAGAGGATTTGAAAAGGGCATTGGATGAGCAATATGGTGGTGAAGAAGAGCTACCACAAACTAATCCTGGTTTCAATAACCCTCCTTTCAAATTCACAAAGTACTCGAATGCATACATGCTTGTATATATCCGGGAAAGTGACAAAGATAAAATTATCTGCAACGTTGATGAGAAAGACATTGCTGAACATTTAAAGATAAGGCTGAAGAAAGAACAGGAAGAAAAGGAGGAAAAAAGAAAATACAAGGCACAAGCTCACCTTTTTACGATAATTAAGGTTGCAAGGGATCAAGACCTAAAGGAACAAATTGGTAAAGATATATATTTTGATCTTGTTGATCATGACAAAGTTCGTAGTTTCCGGATTCAGAAACAGACGCCATTTCAACAATTTAAGGAGGAAGTGGCCAAAGAATTTGGTGTACCTGTTCAGCTACAGAGGTTCTGGATTTGGGCAAAGCGACAAAACCATACCTATCGTCCCAATCGCCCCCTTACTCCTCAGGAGGAATTGCAACCGGTTGGACAAATAAGAGAAGCATCTAACAAGGCAAACACTGCAGAACTTAAGCTGTTTTTGGAAGTAGAGTTACTGGTTGAACGTCCTGTTCCTCCTCCTGACAAATCAAAAGAAGATATTCTTCTTTTCTTTAAGCTTTATGACCCCGAGAAGCAAGAGTTAAGGTATGTTGGTAGACTGATGGTGAAAAGTTCCAGTAAGCCTATGGATATAACTGGAAAATTGAATGAAATGGCTGGCTTCGCTCCTGATGAAGAAATAGAACTATTTGAGGAAATCAAGTTTGAGCCATGTGTAATGTGCGAACACCTGGATAAGAAAACTTCGTTCAAACTGTGTCAAATCGAAGATGGAGATATCATTTGCTTTCAGAAACCTCTTGGTAACAAGGAGACTGAGTGCCGTTATCCAGCTGTACCTTCGTTCCTTGAATATGTCCAGAATCGACAGCTGGTCCGATTTCGTGCTCTGGAAAAACCTAAAGAAGATGAATTTGTTTTGGAGTTGTCAAAGTTGCACACTTATGACGATGTCGTGGAAAGAGTGGCCGAGAAGCTTGGTCTTGACGATCCATCCAAGCTTAGGTTGACATCTCACAATTGCTATTCTCAGCAACCCAAGCCTCAGCCTATCAAATACCGTGGAGTAGACCATTTGTCAGATATGTTAGTTCACTACAATCAGACGTCTGATATTTTGTATTATGAAGTTCTGGACATTCCTCTTCCAGAATTGCAAGGTCTTAAAACCTTAAAAGTTGCTTTCCATCATGCCACGAAGGAAGAGGTGGTAATCCACAATATCAGACTACCTAAACAAAGTACAGTCGGAGATGTTATCAATGAACTTAAAACAAAGGTGGAGCTTTCGCATCCAGATGCAGAACTGAGAATACTTGAGGTGTTTTACCACAAGATATACAAGATTTTCCCATTAACTGAAAGAATTGAGAATATAAACGACCAGTACTGGACTTTGCGAGCTGAGGAGATTCCGGAAGAAGAGAAAAATATTGGTCCAAATGATCGCTTAATTCTAGTGTACCACTTTGCTAAGGAGACTGGACAAAATCAGCAAGTGCAAAACTTCGGGGAGCCCTTCTTCTTGGTAATCCATGAAGGTGAAACTCTTGAAGAAATTAAGAACCGTATCCAAAAGAAGCTGCATGTATCTGATGAGGACTTTGCCAAGTGGAAGTTTGCGTTTATGTCAATGGGGCGTCCGGAGTACTTGCAGGACTCGGATGTTGTTTACAATCGCTTTCAGAGAAGGGATGTCTACGGTGCCTTTGAGCAGTACCTTGGGTTGGAGCACACTGATACCAGTCCTAAGAGGGCTTACTCTGCAAACCAGAACCGACACACTTATGAGAAGCCGGTGAAAATATACAATTAG

Protein:   MTIMTPPPGDQEDEEMLVPHSDLVDGTTQPMEVSETEAAVSTVENQQPAEDPPTLKFTWTVPNFSRQNTRKHYSEVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAATLPYGWSRYAQFSLAVVNQIHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVYVEAEVAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALDEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLKIRLKKEQEEKEEKRKYKAQAHLFTIIKVARDQDLKEQIGKDIYFDLVDHDKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASNKANTAELKLFLEVELLVERPVPPPDKSKEDILLFFKLYDPEKQELRYVGRLMVKSSSKPMDITGKLNEMAGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFKLCQIEDGDIICFQKPLGNKETECRYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKLHTYDDVVERVAEKLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRILEVFYHKIYKIFPLTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDSDVVYNRFQRRDVYGAFEQYLGLEHTDTSPKRAYSANQNRHTYEKPVKIYN